• hbase读取快照数据-lzo压缩遇到的问题


    1.读取hbase快照数据时报UnsatisfiedLinkError: no gplcompression in java.library.path错:

    2019-09-04 17:36:07,441 ERROR [testJobName,1,ReaderTask_HbaseReader_0_1] GPLNativeCodeLoader:35 | Could not load native gpl library
    java.lang.UnsatisfiedLinkError: no gplcompression in java.library.path
    	at java.lang.ClassLoader.loadLibrary(ClassLoader.java:1867)
    	at java.lang.Runtime.loadLibrary0(Runtime.java:870)
    	at java.lang.System.loadLibrary(System.java:1122)
    	at com.hadoop.compression.lzo.GPLNativeCodeLoader.<clinit>(GPLNativeCodeLoader.java:31)
    	at com.hadoop.compression.lzo.LzoCodec.<clinit>(LzoCodec.java:60)
    	at sun.reflect.NativeConstructorAccessorImpl.newInstance0(Native Method)
    	at sun.reflect.NativeConstructorAccessorImpl.newInstance(NativeConstructorAccessorImpl.java:62)
    	at sun.reflect.DelegatingConstructorAccessorImpl.newInstance(DelegatingConstructorAccessorImpl.java:45)
    	at java.lang.reflect.Constructor.newInstance(Constructor.java:423)
    	at org.apache.hadoop.util.ReflectionUtils.newInstance(ReflectionUtils.java:129)
    	at org.apache.hadoop.hbase.io.compress.Compression$Algorithm$1.buildCodec(Compression.java:127)
    	at org.apache.hadoop.hbase.io.compress.Compression$Algorithm$1.getCodec(Compression.java:116)
    	at org.apache.hadoop.hbase.io.compress.Compression$Algorithm.getCompressor(Compression.java:328)
    	at org.apache.hadoop.hbase.util.CompressionTest.testCompression(CompressionTest.java:97)
    	at org.apache.hadoop.hbase.regionserver.HRegion.checkCompressionCodecs(HRegion.java:6562)
    	at org.apache.hadoop.hbase.regionserver.HRegion.openHRegion(HRegion.java:6514)
    	at org.apache.hadoop.hbase.regionserver.HRegion.openHRegion(HRegion.java:6481)
    	at org.apache.hadoop.hbase.regionserver.HRegion.openHRegion(HRegion.java:6452)
    	at org.apache.hadoop.hbase.client.ClientSideRegionScanner.<init>(ClientSideRegionScanner.java:60)
    	at org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormatImpl$RecordReader.initialize(TableSnapshotInputFormatImpl.java:209)
    	at org.apache.hadoop.hbase.mapred.TableSnapshotInputFormat$TableSnapshotRecordReader.<init>(TableSnapshotInputFormat.java:98)
    	at org.apache.hadoop.hbase.mapred.TableSnapshotInputFormat.getRecordReader(TableSnapshotInputFormat.java:152)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.utils.HbaseReaderUtil.read(HbaseReaderUtil.java:95)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader.doStart(HbaseReader.java:94)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader.access$000(HbaseReader.java:32)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader$1.run(HbaseReader.java:76)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader$1.run(HbaseReader.java:73)
    	at java.security.AccessController.doPrivileged(Native Method)
    	at javax.security.auth.Subject.doAs(Subject.java:422)
    	at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1548)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader.start(HbaseReader.java:73)
    	at com.suning.data.integration.engine.stream.plugin.reader.ReaderTask$ReaderThread.run(ReaderTask.java:122)
    	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    	at java.lang.Thread.run(Thread.java:748)
    2019-09-04 17:36:07,460 ERROR [testJobName,1,ReaderTask_HbaseReader_0_1] LzoCodec:70 | Cannot load native-lzo without native-hadoop
    

      在使用java 命令执行时可加上 -Djava.library.path=/opt/hadoop/lib/native,就没有此报错

    java  -Djava.library.path=/opt/hadoop/lib/native -cp lib/*:conf/*:stream-0.0.1.jar com.hbasereader.HbaseReader
    

    2.解决完上述异常后,又出现native-lzo library not available异常

     org.apache.hadoop.hbase.DoNotRetryIOException: java.lang.RuntimeException: native-lzo library not available
    	at org.apache.hadoop.hbase.util.CompressionTest.testCompression(CompressionTest.java:102)
    	at org.apache.hadoop.hbase.regionserver.HRegion.checkCompressionCodecs(HRegion.java:6562)
    	at org.apache.hadoop.hbase.regionserver.HRegion.openHRegion(HRegion.java:6514)
    	at org.apache.hadoop.hbase.regionserver.HRegion.openHRegion(HRegion.java:6481)
    	at org.apache.hadoop.hbase.regionserver.HRegion.openHRegion(HRegion.java:6452)
    	at org.apache.hadoop.hbase.client.ClientSideRegionScanner.<init>(ClientSideRegionScanner.java:60)
    	at org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormatImpl$RecordReader.initialize(TableSnapshotInputFormatImpl.java:209)
    	at org.apache.hadoop.hbase.mapred.TableSnapshotInputFormat$TableSnapshotRecordReader.<init>(TableSnapshotInputFormat.java:98)
    	at org.apache.hadoop.hbase.mapred.TableSnapshotInputFormat.getRecordReader(TableSnapshotInputFormat.java:152)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.utils.HbaseReaderUtil.read(HbaseReaderUtil.java:95)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader.doStart(HbaseReader.java:94)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader.access$000(HbaseReader.java:32)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader$1.run(HbaseReader.java:76)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader$1.run(HbaseReader.java:73)
    	at java.security.AccessController.doPrivileged(Native Method)
    	at javax.security.auth.Subject.doAs(Subject.java:422)
    	at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1548)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader.start(HbaseReader.java:73)
    	at com.suning.data.integration.engine.stream.plugin.reader.ReaderTask$ReaderThread.run(ReaderTask.java:122)
    	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    	at java.lang.Thread.run(Thread.java:748)
    Caused by: java.lang.RuntimeException: native-lzo library not available
    	at com.hadoop.compression.lzo.LzoCodec.getCompressorType(LzoCodec.java:135)
    	at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:148)
    	at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:163)
    	at org.apache.hadoop.hbase.io.compress.Compression$Algorithm.getCompressor(Compression.java:330)
    	at org.apache.hadoop.hbase.util.CompressionTest.testCompression(CompressionTest.java:97)
    	... 21 more
    
    	at com.suning.data.integration.engine.stream.core.exception.DiException.asDiException(DiException.java:51)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.utils.HbaseReaderUtil.read(HbaseReaderUtil.java:131)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader.doStart(HbaseReader.java:94)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader.access$000(HbaseReader.java:32)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader$1.run(HbaseReader.java:76)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader$1.run(HbaseReader.java:73)
    	at java.security.AccessController.doPrivileged(Native Method)
    	at javax.security.auth.Subject.doAs(Subject.java:422)
    	at org.apache.hadoop.security.UserGroupInformation.doAs(UserGroupInformation.java:1548)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.HbaseReader.start(HbaseReader.java:73)
    	at com.suning.data.integration.engine.stream.plugin.reader.ReaderTask$ReaderThread.run(ReaderTask.java:122)
    	at java.util.concurrent.ThreadPoolExecutor.runWorker(ThreadPoolExecutor.java:1149)
    	at java.util.concurrent.ThreadPoolExecutor$Worker.run(ThreadPoolExecutor.java:624)
    	at java.lang.Thread.run(Thread.java:748)
    Caused by: org.apache.hadoop.hbase.DoNotRetryIOException: java.lang.RuntimeException: native-lzo library not available
    	at org.apache.hadoop.hbase.util.CompressionTest.testCompression(CompressionTest.java:102)
    	at org.apache.hadoop.hbase.regionserver.HRegion.checkCompressionCodecs(HRegion.java:6562)
    	at org.apache.hadoop.hbase.regionserver.HRegion.openHRegion(HRegion.java:6514)
    	at org.apache.hadoop.hbase.regionserver.HRegion.openHRegion(HRegion.java:6481)
    	at org.apache.hadoop.hbase.regionserver.HRegion.openHRegion(HRegion.java:6452)
    	at org.apache.hadoop.hbase.client.ClientSideRegionScanner.<init>(ClientSideRegionScanner.java:60)
    	at org.apache.hadoop.hbase.mapreduce.TableSnapshotInputFormatImpl$RecordReader.initialize(TableSnapshotInputFormatImpl.java:209)
    	at org.apache.hadoop.hbase.mapred.TableSnapshotInputFormat$TableSnapshotRecordReader.<init>(TableSnapshotInputFormat.java:98)
    	at org.apache.hadoop.hbase.mapred.TableSnapshotInputFormat.getRecordReader(TableSnapshotInputFormat.java:152)
    	at com.suning.data.integration.engine.stream.plugin.reader.hbasereader.utils.HbaseReaderUtil.read(HbaseReaderUtil.java:95)
    	... 12 more
    Caused by: java.lang.RuntimeException: native-lzo library not available
    	at com.hadoop.compression.lzo.LzoCodec.getCompressorType(LzoCodec.java:135)
    	at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:148)
    	at org.apache.hadoop.io.compress.CodecPool.getCompressor(CodecPool.java:163)
    	at org.apache.hadoop.hbase.io.compress.Compression$Algorithm.getCompressor(Compression.java:330)
    	at org.apache.hadoop.hbase.util.CompressionTest.testCompression(CompressionTest.java:97)
    	... 21 more
    

     错误是从这报出来的:

    经过一周的排查终于找到原因了,真是坑爹,因为引用了hadoop-gpl-compression-xxx.jar,而hadoop-gpl-compression是比较老的版本,

     将hadoop-gpl-compression注释掉,使用hadoop-lzo的jar包,问题解决

    目前在使用Twitter维护的版本,在GitHub上,下载源码 git clone https://github.com/twitter/hadoop-lzo.git ,使用maven编译打包后,将hadoop-lzo-xxx.jar加入到项目中,完美解决上述native-lzo library not available 问题。

    至于如何使用maven编译hadoop-lzo,可以参照我的一篇博客: Hadoop3.1.2 + Hbase2.2.0 设置lzo压缩算法 

    注意:hadoop-gpl-compression已经过时,请使用hadoop-lzo

         hadoop-gpl-compression已经过时,请使用hadoop-lzo

         hadoop-gpl-compression已经过时,请使用hadoop-lzo

       重要的事情说三遍!!!

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  • 原文地址:https://www.cnblogs.com/qixing/p/11514823.html
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