• linux系统redhat7.9 安装R(编译安装)


    查看系统:

    [root@rhel7 home]# cat /etc/redhat-release
    Red Hat Enterprise Linux Server release 7.9 (Maipo)
    [root@rhel7 home]# hostnamectl
       Static hostname: rhel7
             Icon name: computer-vm
               Chassis: vm
            Machine ID: ad6978e78a4642db92f7fa4f4faf5934
               Boot ID: ecf326d768134d9ebed480d41dcfd91b
        Virtualization: vmware
      Operating System: Red Hat Enterprise Linux Server 7.9 (Maipo)
           CPE OS Name: cpe:/o:redhat:enterprise_linux:7.9:GA:server
                Kernel: Linux 3.10.0-1160.el7.x86_64
          Architecture: x86-64

    1、下载安装包

    [root@rhel7 home]# wget https://mirror.bjtu.edu.cn/cran/src/base/R-3/R-3.6.3.tar.gz
    --2021-02-01 01:30:54--  https://mirror.bjtu.edu.cn/cran/src/base/R-3/R-3.6.3.tar.gz
    Resolving mirror.bjtu.edu.cn (mirror.bjtu.edu.cn)... 202.112.154.58, 2001:da8:205::58
    Connecting to mirror.bjtu.edu.cn (mirror.bjtu.edu.cn)|202.112.154.58|:443... connected.
    HTTP request sent, awaiting response... 200 OK
    Length: 33308185 (32M) [application/octet-stream]
    Saving to: ‘R-3.6.3.tar.gz’
    
    100%[===========================================================================================>] 33,308,185  42.6MB/s   in 0.7s
    
    2021-02-01 01:30:55 (42.6 MB/s) - ‘R-3.6.3.tar.gz’ saved [33308185/33308185]
    
    [root@rhel7 home]# ls
    liujiaxin01  R-3.6.3.tar.gz
    [root@rhel7 home]# tar -xzvf R-3.6.3.tar.gz
    [root@rhel7 home]# ls
    liujiaxin01  R-3.6.3  R-3.6.3.tar.gz
    [root@rhel7 home]# cd R-3.6.3/
    [root@rhel7 R-3.6.3]# ls
    ChangeLog    configure     COPYING  etc      m4           Makefile.fw  po      share  SVN-REVISION  tools    VERSION-NICK
    config.site  configure.ac  doc      INSTALL  Makeconf.in  Makefile.in  README  src    tests         VERSION

    2、安装

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
    checking for cl.exe... no
    configure: error: in `/home/R-3.6.3':
    configure: error: no acceptable C compiler found in $PATH
    See `config.log' for more details

    3、

    [root@rhel7 R-3.6.3]# yum install gcc-c++ gcc-gfortran -y
    …………
    …………
    Installed:
      gcc-c++.x86_64 0:4.8.5-44.el7                                  gcc-gfortran.x86_64 0:4.8.5-44.el7
    
    Dependency Installed:
      cpp.x86_64 0:4.8.5-44.el7                 gcc.x86_64 0:4.8.5-44.el7                     glibc-devel.x86_64 0:2.17-317.el7
      glibc-headers.x86_64 0:2.17-317.el7       kernel-headers.x86_64 0:3.10.0-1160.el7       libgfortran.x86_64 0:4.8.5-44.el7
      libquadmath.x86_64 0:4.8.5-44.el7         libquadmath-devel.x86_64 0:4.8.5-44.el7       libstdc++-devel.x86_64 0:4.8.5-44.el7
    
    Complete!

    4、

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
    checking for main in -ltermlib... no
    checking for rl_callback_read_char in -lreadline... no
    configure: error: --with-readline=yes (default) and headers/libs are not available

    5、

    [root@rhel7 R-3.6.3]# yum install readline-devel -y
    …………
    …………
    Installed:
      readline-devel.x86_64 0:6.2-11.el7
    
    Dependency Installed:
      ncurses-devel.x86_64 0:5.9-14.20130511.el7_4
    
    Complete!

    6、

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
    checking X11/Intrinsic.h presence... no
    checking for X11/Intrinsic.h... no
    configure: error: --with-x=yes (default) and X11 headers/libs are not available

    7、

    [root@rhel7 R-3.6.3]# yum install libXt-devel -y
    …………
    …………
    Installed:
      libXt-devel.x86_64 0:1.1.5-3.el7
    
    Dependency Installed:
      libICE-devel.x86_64 0:1.0.9-9.el7                                 libSM-devel.x86_64 0:1.2.2-2.el7
    
    Complete!

    8、

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
    checking for XDR support... yes
    checking for inflateInit2_ in -lz... no
    checking whether zlib support suffices... configure: error: zlib library and headers are required

    9、

    [root@rhel7 R-3.6.3]# yum install zlib-devel bzip2-devel -y
    …………
    …………
    Installed:
      bzip2-devel.x86_64 0:1.0.6-13.el7                                 zlib-devel.x86_64 0:1.2.7-18.el7
    
    Complete!

    10、

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
    checking whether bzip2 support suffices... yes
    checking for lzma_version_number in -llzma... no
    configure: error: "liblzma library and headers are required"

    11、

    [root@rhel7 R-3.6.3]# yum -y install xz-devel.x86_64
    …………
    …………
    Installed:
      xz-devel.x86_64 0:5.2.2-1.el7
    
    Complete!

    12、

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
    checking if lzma version >= 5.0.3... yes
    checking for pcre_fullinfo in -lpcre... no
    checking whether PCRE support suffices... configure: error: pcre >= 8.20 library and headers are required

    13、

    [root@rhel7 R-3.6.3]# yum install pcre -y
    Loaded plugins: langpacks, product-id, search-disabled-repos, subscription-manager
    
    This system is not registered with an entitlement server. You can use subscription-manager to register.
    
    Package pcre-8.32-17.el7.x86_64 already installed and latest version
    Nothing to do

    14、

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
    checking if lzma version >= 5.0.3... yes
    checking for pcre_fullinfo in -lpcre... no
    checking whether PCRE support suffices... configure: error: pcre >= 8.20 library and headers are required

    15、

    [root@rhel7 R-3.6.3]# yum install pcre-devel -y
    …………
    …………
    Installed:
      pcre-devel.x86_64 0:8.32-17.el7
    
    Complete!

    16、

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
    checking for curl/curl.h... no
    configure: error: libcurl >= 7.22.0 library and headers are required with support for https

    17、

    [root@rhel7 R-3.6.3]# yum install curl -y
    Loaded plugins: langpacks, product-id, search-disabled-repos, subscription-manager
    
    This system is not registered with an entitlement server. You can use subscription-manager to register.
    
    Package curl-7.29.0-59.el7.x86_64 already installed and latest version
    Nothing to do
    [root@rhel7 R-3.6.3]# yum install curl-devel -y
    …………
    …………
    Installed:
      libcurl-devel.x86_64 0:7.29.0-59.el7
    
    Complete!

    18、

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
      Recommended packages:        yes
    
    configure: WARNING: you cannot build info or HTML versions of the R manuals
    configure: WARNING: you cannot build PDF versions of the R manuals
    configure: WARNING: you cannot build PDF versions of vignettes and help pages

    19、

    [root@rhel7 R-3.6.3]# yum -y install java-1.8.0-openjdk java-1.8.0-openjdk-devel
    …………
    …………
    Installed:
      java-1.8.0-openjdk-devel.x86_64 1:1.8.0.262.b10-1.el7
    
    Complete!

    20、

    [root@rhel7 R-3.6.3]# ./configure  --enable-R-shlib
    …………
    …………
      Recommended packages:        yes
    
    configure: WARNING: you cannot build info or HTML versions of the R manuals
    configure: WARNING: you cannot build PDF versions of the R manuals
    configure: WARNING: you cannot build PDF versions of vignettes and help pages

    21、

    [root@rhel7 R-3.6.3]# make
    …………
    …………
    Java library path: $(JAVA_HOME)/lib/amd64/server
    JNI cpp flags    : -I$(JAVA_HOME)/../include -I$(JAVA_HOME)/../include/linux
    JNI linker flags : -L$(JAVA_HOME)/lib/amd64/server -ljvm
    Updating Java configuration in /home/R-3.6.3
    Done.
    
    make[1]: Leaving directory `/home/R-3.6.3'

    22、

    [root@rhel7 R-3.6.3]# make install
    …………
    …………
    make[1]: Leaving directory `/home/R-3.6.3/src'
    make[1]: Entering directory `/home/R-3.6.3/tests'
    make[1]: Nothing to be done for `install'.
    make[1]: Leaving directory `/home/R-3.6.3/tests'

    23、测试R

    [root@rhel7 R-3.6.3]# R
    
    R version 3.6.3 (2020-02-29) -- "Holding the Windsock"
    Copyright (C) 2020 The R Foundation for Statistical Computing
    Platform: x86_64-pc-linux-gnu (64-bit)
    
    R is free software and comes with ABSOLUTELY NO WARRANTY.
    You are welcome to redistribute it under certain conditions.
    Type 'license()' or 'licence()' for distribution details.
    
      Natural language support but running in an English locale
    
    R is a collaborative project with many contributors.
    Type 'contributors()' for more information and
    'citation()' on how to cite R or R packages in publications.
    
    Type 'demo()' for some demos, 'help()' for on-line help, or
    'help.start()' for an HTML browser interface to help.
    Type 'q()' to quit R.
    
    > 1 + 2
    [1] 3

    安装完成。

    24、参考:

    https://blog.csdn.net/stone1116/article/details/112986790

    https://blog.csdn.net/wumiqing1/article/details/54232345

    https://blog.csdn.net/john_f_lau/article/details/17652523

    http://blog.sina.com.cn/s/blog_6caea8bf0100zfbu.html

    https://blog.csdn.net/weixin_43404791/article/details/108980273

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  • 原文地址:https://www.cnblogs.com/liujiaxin2018/p/14354897.html
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