https://unix.stackexchange.com/questions/171519/lsof-warning-cant-stat-fuse-gvfsd-fuse-file-system
FUSE and its access rights
lsof by default checks all mounted file systems
including FUSE - file systems implemented in user
space which have special access rights in Linux.
As you can see in this answer on Ask
Ubuntu a mounted GVFS
file system (special case of FUSE) is normally accessible only
to the user which mounted it (the owner of gvfsd-fuse).
Even root cannot access it. To override this
restriction it is possible to use mount options allow_root
and allow_other. The option must be also enabled
in the FUSE daemon which is described for example in this answer ...but
in your case you do not need to (and should not) change the
access rights.
Excluding file systems from lsof
In your case lsof does not need to check the GVFS
file systems so you can exclude the stat() calls
on them using the -e option (or you can just
ignore the waring):
lsof -e /run/user/1000/gvfs
Checking certain files by lsof
You are using lsof to get information about all processes running on your system and only then you filter the complete output using grep. If you want to check just certain files and the related processes use the -f option without a value directly following it then specify a list of files after the "end of options" separator --. This will be considerably faster.
lsof -e /run/user/1000/gvfs -f -- /tmp/report.csv
General solution
To exclude all mounted file systems on which stat() fails you can run something like this (in bash):
x=(); for a in $(mount | cut -d' ' -f3); do test -e "$a" || x+=("-e$a"); done
lsof "${x[@]}" -f -- /tmp/report.csv
Or to be sure to use stat() (test -e could be implemented a different way):
x=(); for a in $(mount | cut -d' ' -f3); do stat --printf= "$a" 2>/dev/null || x+=("-e$a"); done
lsof always tries to obtain some basic information about all filesystems, even if the arguments happen to imply that no result will come from a particular filesystem. If it's unable to access a filesystem (specifically, to call stat at its mount point, as the message says), it complains.
As root, you would normally have permission to access filesystems. However, due to the inner workings of FUSE, root does not automatically have all powers on a FUSE filesystem. This isn't a security feature (root can become the user who owns the filesystem and get access that way), it's a technical limitation.
GVFS-FUSE is a FUSE interface to GVFS, which is a mechanism that allows Gnome applications to access virtual filesystems implemented by Gnome plugins: GVFS grants non-Gnome applications access to these virtual filesystems via the regular filesystem interface.
-- 刘林强 136-1133-1997 liulinqiang@unipus.cn 北京外研在线教育科技有限公司 外语教学与研究出版社