• 视频第5讲-ID转换


    查找芯片平台(比如GSE42872的平台文件GPL6244)对应的数据包:

    参考:http://www.bio-info-trainee.com/1399.html

     gpl           organism                  bioc_package

    1     GPL32       Mus musculus                        mgu74a
    2     GPL33       Mus musculus                        mgu74b
    3     GPL34       Mus musculus                        mgu74c
    6     GPL74       Homo sapiens                        hcg110
    7     GPL75       Mus musculus                     mu11ksuba
    8     GPL76       Mus musculus                     mu11ksubb
    9     GPL77       Mus musculus                     mu19ksuba
    10    GPL78       Mus musculus                     mu19ksubb
    11    GPL79       Mus musculus                     mu19ksubc
    12    GPL80       Homo sapiens                        hu6800
    13    GPL81       Mus musculus                      mgu74av2
    14    GPL82       Mus musculus                      mgu74bv2
    15    GPL83       Mus musculus                      mgu74cv2
    16    GPL85  Rattus norvegicus                        rgu34a
    17    GPL86  Rattus norvegicus                        rgu34b
    18    GPL87  Rattus norvegicus                        rgu34c
    19    GPL88  Rattus norvegicus                         rnu34
    20    GPL89  Rattus norvegicus                         rtu34
    22    GPL91       Homo sapiens                      hgu95av2
    23    GPL92       Homo sapiens                        hgu95b
    24    GPL93       Homo sapiens                        hgu95c
    25    GPL94       Homo sapiens                        hgu95d
    26    GPL95       Homo sapiens                        hgu95e
    27    GPL96       Homo sapiens                       hgu133a
    28    GPL97       Homo sapiens                       hgu133b
    29    GPL98       Homo sapiens                     hu35ksuba
    30    GPL99       Homo sapiens                     hu35ksubb
    31   GPL100       Homo sapiens                     hu35ksubc
    32   GPL101       Homo sapiens                     hu35ksubd
    36   GPL201       Homo sapiens                       hgfocus
    37   GPL339       Mus musculus                       moe430a
    38   GPL340       Mus musculus                     mouse4302
    39   GPL341  Rattus norvegicus                       rae230a
    40   GPL342  Rattus norvegicus                       rae230b
    41   GPL570       Homo sapiens                   hgu133plus2
    42   GPL571       Homo sapiens                      hgu133a2
    43   GPL886       Homo sapiens                     hgug4111a
    44   GPL887       Homo sapiens                     hgug4110b
    45  GPL1261       Mus musculus                    mouse430a2
    49  GPL1352       Homo sapiens                       u133x3p
    50  GPL1355  Rattus norvegicus                       rat2302
    51  GPL1708       Homo sapiens                     hgug4112a
    54  GPL2891       Homo sapiens                       h20kcod
    55  GPL2898  Rattus norvegicus                     adme16cod
    60  GPL3921       Homo sapiens                     hthgu133a
    63  GPL4191       Homo sapiens                       h10kcod
    64  GPL5689       Homo sapiens                     hgug4100a
    65  GPL6097       Homo sapiens               illuminaHumanv1
    66  GPL6102       Homo sapiens               illuminaHumanv2
    67  GPL6244       Homo sapiens   hugene10sttranscriptcluster
    68  GPL6947       Homo sapiens               illuminaHumanv3
    69  GPL8300       Homo sapiens                      hgu95av2
    70  GPL8490       Homo sapiens   IlluminaHumanMethylation27k
    71 GPL10558       Homo sapiens               illuminaHumanv4
    72 GPL11532       Homo sapiens   hugene11sttranscriptcluster
    73 GPL13497       Homo sapiens         HsAgilentDesign026652
    74 GPL13534       Homo sapiens  IlluminaHumanMethylation450k
    75 GPL13667       Homo sapiens                        hgu219
    76 GPL15380       Homo sapiens      GGHumanMethCancerPanelv1
    77 GPL15396       Homo sapiens                     hthgu133b
    78 GPL17897       Homo sapiens                     hthgu133a
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  • 原文地址:https://www.cnblogs.com/SWTwanzhu/p/13198399.html
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